You can modify the duration data is kept in the BAMPrimaryImport database using the bam_Metadata_Activities table:
http://technet.microsoft.com/en-us/library/ms962341.aspx
In addition, if you are using Real-time Aggregations for BAM data, you can set the window of data kept using the bm utility and the set-rtawindow command:
http://msdn.microsoft.com/en-us/library/aa559458.aspx
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